🧬 Motif Mapper - Interactive Visualization

About

This page shows all unique motifs found in 2000bp of ISG genes.

Click on a motif in the list on the right to see all its occurrences across genes and their sequence locations.

📊 Statistics:
Total Motif Hits: 8748
Genes Analyzed: 139
Unique Motifs Found: 268
📊 View Gene-Motif Heatmap

Unique Motifs

Total Hits: 8748
Genes: 139
Unique Motifs: 268
ATATATATATAT 593×
Click to view all 593 occurrences
TCTTCTCTTC 557×
Click to view all 557 occurrences
TCTCCTCT 479×
Click to view all 479 occurrences
CGCGGCAC 190×
Click to view all 190 occurrences
CCGCCCCGCT 172×
Click to view all 172 occurrences
CCWGGYTG 148×
Click to view all 148 occurrences
NCTGCCCN 129×
Click to view all 129 occurrences
CGCCCCGC 124×
Click to view all 124 occurrences
SSTGCCBTGC 108×
Click to view all 108 occurrences
CAGCGCTT 105×
Click to view all 105 occurrences
TTTCRCTTTC 91×
Click to view all 91 occurrences
AAACAAAC 89×
Click to view all 89 occurrences
TTTACAAC 80×
Click to view all 80 occurrences
CAGCTGCCCA 76×
Click to view all 76 occurrences
CAAACAGATA 72×
Click to view all 72 occurrences
GTAGCCTTTY 68×
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AAAGATCT 67×
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CCAGCGTGTGGC 64×
Click to view all 64 occurrences
GCGGCAGCGC 63×
Click to view all 63 occurrences
CCTGCAGGTC 61×
Click to view all 61 occurrences
TCACATCA 60×
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GCAGTATGCT 59×
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KTGCTGACAA 58×
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ATTTTATA 58×
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CMGCCCCGCBCC 52×
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AGGAACTTWC 51×
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ACGGAGCTGG 51×
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CCCAGCGT 50×
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TTAGATCTAT 49×
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TACATCCAAG 49×
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TGCTKATTTTAA 49×
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GTGCCGTGGGCT 48×
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AGAATTCT 46×
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CAGCAGCGCGGG 46×
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GSCCGGCWGCSG 46×
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GGAGTAGGCGGC 44×
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TGAGCTGCCTTC 44×
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AAACAARCAA 44×
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CAAACAAACAAA 44×
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TTCTGTTACC 43×
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TCCCTGGAGG 43×
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TACTTCTMAGAA 42×
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TTGTACAGCT 42×
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AAGGCAGGCT 41×
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AVCTTCTCWGGG 40×
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CCGCTCCGCCGC 39×
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TGGGCAGCCYGT 39×
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CACGGCTTCT 39×
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CTCCCCTGTA 39×
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CAGCGTCTGG 39×
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GAAAGYGA 38×
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TGTGAAAGTA 37×
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CTGGACAGTG 37×
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TAGAAGAAGCTG 37×
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ATGCTGGATG 36×
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TCAAACCATT 35×
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TAGGATATAA 35×
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CAACCTGTCTTT 35×
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CTTTTTATAATC 35×
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GAGAAGAGAAGA 34×
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GCMMAKGGCAGG 34×
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TCATTTTCTG 34×
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AGCAGACTGCCT 34×
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GTGCGGCCCT 34×
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TACTTTCAAAGA 33×
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TTAGTTTGGA 33×
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AAACGTACGT 32×
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GAGGGCCAGC 32×
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ATTCAGTGAA 32×
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GCACCTGCCTGT 32×
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AAGCCGAGAAGG 32×
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AAGCCTTTTAAA 31×
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TTTACCACGG 31×
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YGCCCGCAGC 31×
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CTGGGCAGTGGG 30×
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CTCTCCTCTC 30×
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ARAAAYTTGGHT 29×
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CCTTCTCG 29×
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GGAAAGTTCT 29×
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CTCCTTGAGG 29×
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CAGWGGCTGCWW 29×
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CAGCACCTGGTA 28×
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TCACTCCAAGAA 28×
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CCGCACCGACAG 28×
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TGAGTATTTT 27×
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TAWATAWATTRT 27×
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ACCTCCTCAG 27×
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AATCWTAGAGTG 27×
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GGAAAGCGAAAG 27×
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AGATGGMGGG 27×
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TGAACTGCAAGC 26×
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AATAAGTTAG 26×
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ATCTTTTCAAGG 25×
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TATTAAGGAA 25×
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GATCACATCGCA 25×
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TGCCGCTGGC 25×
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CTGACAGAAG 25×
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TGGGNGCCRTCC 25×
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TTTATATTCT 25×
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TTCAGTTCCACC 24×
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TTTTCCACATTC 24×
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ACATGYTGTAAA 24×
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AAGTTCTTTAAT 24×
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GCCAGGGACAGG 24×
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GAGCTGGAGTGT 24×
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GGGGCGCGCA 24×
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TAAGTAAAAGAA 24×
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TTAAAAACCA 23×
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AGGATGTGGATG 23×
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TGAMWRATTCCT 23×
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TCCACAACCT 23×
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TTCTTGTATC 23×
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GGCGAGAGGA 23×
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GTGCCAAGAAAG 22×
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KCTTCACACCTT 22×
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GTCCACAGCATG 22×
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GGAASCACTGCA 21×
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GGCTCACCGAGC 21×
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AACAAACCCCTG 21×
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ATTCAAGACTTT 20×
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CCGCGCCCTTCG 20×
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TATTCGCAGC 20×
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TGTNGAATTC 20×
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CCTTCCDGACAC 20×
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AAGGCSAGCT 19×
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CTCTCAAGTCTC 19×
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AMCAGAATTTTC 19×
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AAGTATAAACAA 19×
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CCTTTCTTACTG 19×
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GTCTTTCT 19×
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AAATGTAATTGT 19×
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TTTTCTAGAG 19×
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CAGCCCTGCC 19×
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AAAATAAGGGTC 19×
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AAGCTTGA 18×
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CATCTGTCCATC 18×
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CYGAGTGAAAGG 18×
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GCTATTCACAGC 18×
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GCWCTTTCTAAG 18×
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CTTGGAGGGGAC 18×
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YAGCGCTTTC 18×
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ATGGCAAACT 18×
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TACCGTTTTA 18×
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AAACTCATAAAA 18×
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GAAAGCAATCTT 18×
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CAGAACGGCTGG 17×
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AGCYTTGAGGTC 17×
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CAGCCCGCACCG 17×
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CCTTTAAAGAWA 17×
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ATAAATCC 17×
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AAAAACAACTGA 17×
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CTAGTGTCTT 17×
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ATAACACAGTAA 17×
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AGGCAGGCGCTG 17×
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GGAACAGCGA 17×
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CTTCASGTVCTG 17×
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AAAGTATTTTGC 17×
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TGTTACACTTTT 17×
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TTCAGTCAAAAC 17×
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AAACAVCCTCAC 17×
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CATCAAAAATAG 17×
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AGTCTGGGCAGC 17×
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GCACATGCAAGC 16×
Click to view all 16 occurrences
GTTTTCAAGACA 16×
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GAGTGCCCAGAA 16×
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CTTYTGTKTATG 16×
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CATTAAAAACCA 16×
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CTCTTTATAA 16×
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TGAATTCGCT 16×
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GAGAGTGGTGAG 16×
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CCAGCTCCCGCA 16×
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AACAGCTACT 16×
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CACATAAAGCAC 16×
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TAGAAATAATTK 15×
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GAGGGGATAAGT 15×
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TGATTTGTAATT 15×
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TGTATTCATAAW 15×
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TTTGATGTCAGG 15×
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GCGTCTCACT 15×
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GAAAACAGTGAC 15×
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GAGGGGCAGCTC 15×
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GACAAAAAAAAC 15×
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AGCTCATTTACC 15×
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TTTTCTKATC 15×
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GGTTGGAAGRAA 14×
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GTTACAAT 14×
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CCTCAWGAGCTG 14×
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CTTTGCTGACAA 14×
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TACATCAAGT 14×
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CTGCCCCCGCTC 14×
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TGATWGGACARS 14×
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TTTGAATTGT 14×
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CTCCAAAATCAR 14×
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TTGTTATTTG 14×
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CTCGCGGGCT 14×
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TGTCTTCTGGGA 14×
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AGTACTGAGTAA 14×
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TGTTTAGTTTGG 14×
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AWTWCACTTCAG 13×
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YGCTCGCCTCCT 13×
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CCTCKCTCCACA 13×
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CTCCCTGCTAGC 13×
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GATAAAATGTAG 13×
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AAAATACGTATT 13×
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GGAAAGGCAACC 13×
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AAGATGGCGGGC 13×
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ACTGTAATTTTC 13×
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TGTGTTTGTRTA 13×
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ATTGAAGAATAA 13×
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CCTCCTAGGCAG 13×
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ACATGCTAGG 13×
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ACTGAGGCCTCA 13×
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MCCCTCCCCTGA 13×
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KTTCAKCTTGGT 13×
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AGGCTCCTGCTC 12×
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GGCGCTGGGACG 12×
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TTTGATTTCTGT 12×
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TCGAGCGGCTCC 12×
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AVTMTATATAMA 12×
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CGCTTTCGTTTC 12×
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AGGGCAGCAAGT 12×
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TCTTTCAGCAGA 12×
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TGKCTGTTGCCA 12×
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TATCTGTTCT 12×
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CAGAGAAGCTGT 12×
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ATAAGAGTWGGA 12×
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CTGTTGCTTTTT 12×
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TGTTWCTGCTAT 12×
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GGACAGCCCCAA 11×
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TATTTCTTCAAT 11×
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CCCCTCCTCTCS 11×
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GATAGCTAAA 11×
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AACAAAGTCA 11×
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AATTCATACCAG 11×
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TAGGTTGGAA 11×
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CCACGGAGTGCC 11×
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AACAAAAATCAA 11×
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GAGGGAAKAAAG 11×
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KYCTTCCTCACT 11×
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GGCCCCATCTAG 11×
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TGTGGGACTTCT 11×
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GATTCTGTTGTT 10×
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GATATTAGCAGC 10×
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GCACGACACTGC 10×
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ATCGAATACC 10×
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AAATACGTAT 10×
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CAAGAGGGTGAG 10×
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GCSCCTCCTCAG 10×
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GTTTTTGTCCTG 10×
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AGAGGTTGGGTT
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NNAAACAATANW
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TGCCAGCCTCCT
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CTGGGACAAAAC
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TGCAGKATGCTG
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GTGCCGTGCGGC
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AGCTGTCATCCT
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TTTATTGTGGTT
Click to view all 8 occurrences
CTACAGATGTGC
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AATGGATCTTTA
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AGCTTGCATTGA
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AGAATTCAGGAA
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GATAGAGGTGAG
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GCCTCCTGCGGT
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ACCGCGCGCCCC
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CCTCCTTTAGTT
Click to view all 7 occurrences
CYATKACACATG
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GCTTGAGAAGGG
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CCCTCTCACCAC
Click to view all 6 occurrences

Occurrences of:

Sequences with Motif Locations